FOLDALIGN

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fa2col


BiRC


Stormo lab

NAME

fa2col -Converts foldalign format into column format.  

SYNOPSIS

fa2col file  

DESCRIPTION

Converts structural alignments generated by FOLDALIGN, into a column format. See http://www.bioinf.au.dk/colformat for details about the column format.  

AUTHORS

Laurie J. Heyer and Jan Gorodkin
(laheyer@davidson.edu and gorodkin@bioinf.au.dk)  

REFERENCES

For any use of FOLDALIGN programs please cite:

J. Gorodkin, L. J. Heyer and G. D. Stormo. Finding the most significant common sequence and structure motifs in a set of RNA sequences. Nucleic Acids Research, 25:18, 3724-3732, 1997.

J. Gorodkin, L. J. Heyer and G. D. Stormo. Finding Common Sequence and Structure Motifs in a set of RNA sequences. Proceedings ISMB-97, pp. 120-123, 1997.  

CONTACT

If you have questions, bug reports, complaints, comments, requests, email foldalign@bioinf.au.dk.

SEE ALSO

FOLDALIGN, sortfalign, prefilter, mainfilter, makefamatrix, genmatrix

Index

NAME

SYNOPSIS

DESCRIPTION

AUTHORS

REFERENCES

CONTACT

SEE ALSO

Comments, questions, etc., email foldalign@bioinf.au.dk